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1

Identifying future research needs in landscape genetics: where to from here?

Niko Balkenhol, Felix Gugerli, Sam A. Cushman, Lisette P. Waits, Aurélie Coulon, J. W. Arntzen, Rolf Holderegger, Helene H. Wagner, Participants of the Landscape Genetics Research Agenda Workshop 2007

Journal:

Landscape Ecology

Année:

2009

Langue:

english

Fichier:

PDF, 181 KB

english, 2009

2

Improved recovery of ancient DNA from subfossil wood - application to the world's oldest Late Glacial pine forest

Lendvay, Bertalan, Hartmann, Martin, Brodbeck, Sabine, Nievergelt, Daniel, Reinig, Frederick, Zoller, Stefan, Parducci, Laura, Gugerli, Felix, Büntgen, Ulf, Sperisen, Christoph

Journal:

New Phytologist

Année:

2018

Langue:

english

Fichier:

PDF, 983 KB

english, 2018

3

The Evolutionary Split of Pinaceae from Other Conifers: Evidence from an Intron Loss and a Multigene Phylogeny

Felix Gugerli, Christoph Sperisen, Urs Büchler, Ivano Brunner, Sabine Brodbeck, Jeffrey D. Palmer, Yin-Long Qiu

Journal:

Molecular Phylogenetics and Evolution

Année:

2001

Langue:

english

Fichier:

PDF, 146 KB

english, 2001

4

Microsatellites reveal regional population differentiation and isolation in Lobaria pulmonaria, an epiphytic lichen

JEAN-CLAUDE WALSER, ROLF HOLDEREGGER, FELIX GUGERLI, SUSAN EVA HOEBEE, CHRISTOPH SCHEIDEGGER

Journal:

Molecular Ecology

Année:

2005

Langue:

english

Fichier:

PDF, 497 KB

english, 2005

5

Landscape-level gene flow in Lobaria pulmonaria, an epiphytic lichen

SILKE WERTH, FELIX GUGERLI, ROLF HOLDEREGGER, HELENE H. WAGNER, DANIELA CSENCSICS, CHRISTOPH SCHEIDEGGER

Journal:

Molecular Ecology

Année:

2007

Langue:

english

Fichier:

PDF, 197 KB

english, 2007

6

Genetic consequences of glacial survival and postglacial colonization in Norway spruce: combined analysis of mitochondrial DNA and fossil pollen

MARI METTE TOLLEFSRUD, ROY KISSLING, FELIX GUGERLI, ØYSTEIN JOHNSEN, TORE SKRØPPA, RACHID CHEDDADI, W. O. VAN DER KNAAP, MAŁGORZATA LATAŁOWA, RUTH TERHÜRNE-BERSON, THOMAS LITT, THOMAS GEBUREK, CHRISTI

Journal:

Molecular Ecology

Année:

2008

Langue:

english

Fichier:

PDF, 2.44 MB

english, 2008

7

Ancient Plant DNA: Review and Prospects

Felix Gugerli, Laura Parducci and Rémy J. Petit

Journal:

New Phytologist

Année:

2005

Langue:

english

Fichier:

PDF, 1.60 MB

english, 2005

8

Are adaptive loci transferable across genomes of related species? Outlier and environmental association analyses in Alpine Brassicaceae species

Zulliger, Deborah, Schnyder, Elvira, Gugerli, Felix

Journal:

Molecular Ecology

Année:

2013

Langue:

english

Fichier:

PDF, 272 KB

english, 2013

9

No distinct barrier effects of highways and a wide river on the genetic structure of the Alpine newt (Ichthyosaura alpestris) in densely settled landscapes

Luqman, Hirzi, Muller, Roxane, Vaupel, Andrea, Brodbeck, Sabine, Bolliger, Janine, Gugerli, Felix

Journal:

Conservation Genetics

Année:

2018

Langue:

english

Fichier:

PDF, 4.03 MB

english, 2018

10

Conservation genetics: linking science with practice

Holderegger, Rolf, Balkenhol, Niko, Bolliger, Janine, Engler, Jan O., Gugerli, Felix, Hochkirch, Axel, Nowak, Carsten, Segelbacher, Gernot, Widmer, Alex, Zachos, Frank E.

Journal:

Molecular Ecology

Année:

2019

Langue:

english

Fichier:

PDF, 664 KB

english, 2019

11

Genomic signatures of convergent adaptation to Alpine environments in three Brassicaceae species

Rellstab, Christian, Zoller, Stefan, Sailer, Christian, Tedder, Andrew, Gugerli, Felix, Shimizu, Kentaro K., Holderegger, Rolf, Widmer, Alex, Fischer, Martin C.

Journal:

Molecular Ecology

Année:

2020

Fichier:

PDF, 4.17 MB

2020

12

Haplotype variation in a mitochondrial tandem repeat of Norway spruce (Picea abies) populations suggests a serious founder effect during postglacial re-colonization of the western Alps

Felix Gugerli, Christoph Sperisen, Urs Büchler, Federica Magni, Thomas Geburek, Sylvain Jeandroz, Josef Senn

Journal:

Molecular Ecology

Année:

2001

Langue:

english

Fichier:

PDF, 350 KB

english, 2001

13

Hybridization ofSaxifraga oppositifoliaandS. biflora(Saxifragaceae) in a mixed alpine population

Journal:

Plant Systematics and Evolution

Année:

1997

Langue:

english

Fichier:

PDF, 1.33 MB

english, 1997

14

Gradual decline in genetic diversity in Swiss stone pine populations (Pinus cembra) across Switzerland suggests postglacial re-colonization into the Alps from a common eastern glacial refugium

Felix Gugerli, Martin Rüegg, Giovanni G. Vendramin

Journal:

Année:

2009

Langue:

english

Fichier:

PDF, 324 KB

english, 2009

15

Effects of floral neighborhood on seed set and degree of outbreeding in a high-alpine cushion plant

Lea R. Wirth, Nickolas M. Waser, René Graf, Felix Gugerli, Urs Landergott, Andreas Erhardt, Hans Peter Linder, Rolf Holderegger

Journal:

Année:

2011

Langue:

english

Fichier:

PDF, 1.66 MB

english, 2011

16

Effect of elevation on sexual reproduction in alpine populations ofSaxifraga oppositifolia(Saxifragaceae)

Journal:

Année:

1998

Langue:

english

Fichier:

PDF, 427 KB

english, 1998

17

Field surveys of capercaillie (Tetrao urogallus) in the Swiss Alps underestimated local abundance of the species as revealed by genetic analyses of non-invasive samples

Gwenaël Jacob, Rolf Debrunner, Felix Gugerli, Bernhard Schmid, Kurt Bollmann

Journal:

Conservation Genetics

Année:

2010

Langue:

english

Fichier:

PDF, 314 KB

english, 2010

18

Adaptive vs. neutral genetic diversity: implications for landscape genetics

Rolf Holderegger, Urs Kamm, Felix Gugerli

Journal:

Landscape Ecology

Année:

2006

Langue:

english

Fichier:

PDF, 312 KB

english, 2006

19

Insertions–Deletions in a Microsatellite Flanking Region May Be Resolved by Variation in Stuttering Patterns

Felix Gugerli, Sabine Brodbeck, Rolf Holderegger

Journal:

Plant Molecular Biology Reporter

Année:

2008

Langue:

english

Fichier:

PDF, 180 KB

english, 2008

20

Between-year variation in seed weights across altitudes in the high-alpine plantEritrichium nanum

Lea R. Wirth, René Graf, Felix Gugerli, Urs Landergott, Rolf Holderegger

Journal:

Année:

2010

Langue:

english

Fichier:

PDF, 182 KB

english, 2010

21

Forest ecosystem genomics and adaptation: EVOLTREE conference report

Antoine Kremer, Barbara Vinceti, Ricardo Alia, Jaroslav Burczyk, Stephen Cavers, Bernd Degen, Reiner Finkeldey, Silvia Fluch, Dusan Gömöry, Felix Gugerli, Hans Peter Koelewijn, Jarkko Koskela, Françoi

Journal:

Tree Genetics & Genomes

Année:

2011

Langue:

english

Fichier:

PDF, 134 KB

english, 2011

22

Variation in the chloroplast DNA of Swiss stone pine (Pinus cembra L.) reflects contrasting post-glacial history of populations from the Carpathians and the Alps

Maria Höhn, Felix Gugerli, Peter Abran, György Bisztray, Anna Buonamici, Klara Cseke, Levente Hufnagel, Celestino Quintela-Sabarís, Federico Sebastiani, Giovanni Giuseppe Vendramin

Journal:

Journal of Biogeography

Année:

2009

Langue:

english

Fichier:

PDF, 345 KB

english, 2009

23

Concordant genetic breaks, identified by combining clustering and tessellation methods, in two co-distributed alpine plant species

CONNY THIEL-EGENTER, ROLF HOLDEREGGER, SABINE BRODBECK, INTRABIODIV CONSORTIUM, FELIX GUGERLI

Journal:

Molecular Ecology

Année:

2009

Langue:

english

Fichier:

PDF, 8.31 MB

english, 2009

24

Tracking genes of ecological relevance using a genome scan in two independent regional population samples of Arabis alpina

BÉNÉDICTE N. PONCET, DORIS HERRMANN, FELIX GUGERLI, PIERRE TABERLET, ROLF HOLDEREGGER, LUDOVIC GIELLY, DELPHINE RIOUX, WILFRIED THUILLER, SERGE AUBERT, STÉPHANIE MANEL

Journal:

Molecular Ecology

Année:

2010

Langue:

english

Fichier:

PDF, 410 KB

english, 2010

25

Effects of species traits on the genetic diversity of high-mountain plants: a multi-species study across the Alps and the Carpathians

Conny Thiel-Egenter, Felix Gugerli, Nadir Alvarez, Sabine Brodbeck, Elżbieta Cieślak, Licia Colli, Thorsten Englisch, Myriam Gaudeul, Ludovic Gielly, Grażyna Korbecka, Riccardo Negrini, Ovidiu Paun, M

Journal:

Global Ecology and Biogeography

Année:

2009

Langue:

english

Fichier:

PDF, 635 KB

english, 2009

26

Ancient plant DNA: review and prospects

Felix Gugerli, Laura Parducci, Rémy J. Petit

Journal:

New Phytologist

Année:

2005

Langue:

english

Fichier:

PDF, 249 KB

english, 2005

27

Tales of the unexpected: Phylogeography of the arctic-alpine model plant Saxifraga oppositifolia (Saxifragaceae) revisited

MANUELA WINKLER, ANDREAS TRIBSCH, GERALD M. SCHNEEWEISS, SABINE BRODBECK, FELIX GUGERLI, ROLF HOLDEREGGER, RICHARD J. ABBOTT, PETER SCHÖNSWETTER

Journal:

Molecular Ecology

Année:

2012

Langue:

english

Fichier:

PDF, 589 KB

english, 2012

28

Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation

STÉPHANIE MANEL, FELIX GUGERLI, WILFRIED THUILLER, NADIR ALVAREZ, PIERRE LEGENDRE, ROLF HOLDEREGGER, LUDOVIC GIELLY, PIERRE TABERLET, IntraBioDiv Consortium

Journal:

Molecular Ecology

Année:

2012

Langue:

english

Fichier:

PDF, 360 KB

english, 2012

29

Parsimony-based pedigree analysis and individual-based landscape genetics suggest topography to restrict dispersal and connectivity in the endangered capercaillie

Urs Kormann, Felix Gugerli, Nicolas Ray, Laurent Excoffier, Kurt Bollmann

Journal:

Biological Conservation

Année:

2012

Langue:

english

Fichier:

PDF, 466 KB

english, 2012

30

Pronounced fluctuations of spruce bark beetle (Scolytinae: Ips typographus) populations do not invoke genetic differentiation

Felix Gugerli, Rolf Gall, Franz Meier, Beat Wermelinger

Journal:

Forest Ecology and Management

Année:

2008

Langue:

english

Fichier:

PDF, 340 KB

english, 2008

31

Genetic consequences of low local tree densities – Implications for the management of naturally rare, insect pollinated species in temperate forests

Urs Kamm, Felix Gugerli, Peter Rotach, Peter Edwards, Rolf Holderegger

Journal:

Forest Ecology and Management

Année:

2011

Langue:

english

Fichier:

PDF, 712 KB

english, 2011

32

Landscape genetics of plants

Rolf Holderegger, Dominique Buehler, Felix Gugerli, Stéphanie Manel

Journal:

Trends in Plant Science

Année:

2010

Langue:

english

Fichier:

PDF, 276 KB

english, 2010

33

Nunatak survival, tabula rasa and the influence of the Pleistocene ice-ages on plant evolution in mountain areas

Felix Gugerli, Rolf Holderegger

Journal:

Trends in Plant Science

Année:

2001

Langue:

english

Fichier:

PDF, 35 KB

english, 2001

34

Effects of seed mass on seedling height and competition in European white oaks

Landergott, Urs, Gugerli, Felix, Hoebee, Susan E., Finkeldey, Reiner, Holderegger, Rolf

Journal:

Flora - Morphology, Distribution, Functional Ecology of Plants

Année:

2012

Langue:

english

Fichier:

PDF, 384 KB

english, 2012

35

Reduced fitness at early life stages in peripheral versus core populations of Swiss stone pine (Pinus cembra) is not reflected by levels of inbreeding in seed families

Salzer, Kristina, Gugerli, Felix

Journal:

Année:

2012

Langue:

english

Fichier:

PDF, 437 KB

english, 2012

36

Where do you come from, where do you go? Directional migration rates in landscape genetics

Holderegger, Rolf, Gugerli, Felix

Journal:

Molecular Ecology

Année:

2012

Langue:

english

Fichier:

PDF, 373 KB

english, 2012

37

An outlier locus relevant in habitat-mediated selection in an alpine plant across independent regional replicates

Buehler, Dominique, Poncet, BÃ©nÃ©dicte N., Holderegger, Rolf, Manel, StÃ©phanie, Taberlet, Pierre, Gugerli, Felix

Journal:

Evolutionary Ecology

Année:

2013

Langue:

english

Fichier:

PDF, 480 KB

english, 2013

38

Genetic discontinuities in roe deer (Capreolus capreolus) coincide with fenced transportation infrastructure

Hepenstrick, Daniel, Thiel, Dominik, Holderegger, Rolf, Gugerli, Felix

Journal:

Basic and Applied Ecology

Année:

2012

Fichier:

PDF, 820 KB

2012

39

Tree growth response along an elevational gradient: climate or genetics?

Gregory M. King, Felix Gugerli, Patrick Fonti, David C. Frank

Journal:

Année:

2013

Langue:

english

Fichier:

PDF, 1004 KB

english, 2013

40

Selection criteria for scoring amplified fragment length polymorphisms (AFLPs) positively affect the reliability of population genetic parameter estimates

Shore, Joel, Herrmann, Doris, Poncet, Bénédicte N., Manel, Stéphanie, Rioux, Delphine, Gielly, Ludovic, Taberlet, Pierre, Gugerli, Felix

Journal:

Année:

2010

Fichier:

PDF, 224 KB

2010

41

Population genomic footprints of selection and associations with climate in natural populations of Arabidopsis halleri from the Alps

Fischer, Martin C., Rellstab, Christian, Tedder, Andrew, Zoller, Stefan, Gugerli, Felix, Shimizu, Kentaro K., Holderegger, Rolf, Widmer, Alex

Journal:

Molecular Ecology

Année:

2013

Langue:

english

Fichier:

PDF, 564 KB

english, 2013

42

Dynamics of genetic variation in Taxus baccata : local versus regional perspectives

Hilfiker, Karin, Holderegger, Rolf, Rotach, Peter, Gugerli, Felix

Journal:

Canadian Journal of Botany

Année:

2004

Fichier:

PDF, 540 KB

2004

43

Strong nuclear differentiation contrasts with widespread sharing of plastid DNA haplotypes across taxa in European purple saxifrages ( Saxifraga section Porphyrion subsection Oppositifoliae )

Winkler, Manuela, Tribsch, Andreas, Schneeweiss, Gerald M., Brodbeck, Sabine, Gugerli, Felix, Holderegger, Rolf, Schönswetter, Peter

Journal:

Botanical Journal of the Linnean Society

Année:

2013

Langue:

english

Fichier:

PDF, 1.09 MB

english, 2013

44

QUANTIFYING DISPERSAL AND ESTABLISHMENT LIMITATION IN A POPULATION OF AN EPIPHYTIC LICHEN

Werth, Silke, Wagner, Helene H., Gugerli, Felix, Holderegger, Rolf, Csencsics, Daniela, Kalwij, Jesse M., Scheidegger, Christoph

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 218 KB

english, 2006

45

Seed perishability determines the caching behaviour of a food-hoarding bird

Neuschulz, Eike Lena, Mueller, Thomas, Bollmann, Kurt, Gugerli, Felix, Böhning-Gaese, Katrin, Boutin, Stan

Journal:

Journal of Animal Ecology

Année:

2015

Langue:

english

Fichier:

PDF, 785 KB

english, 2015

46

Genetic structure inPinus cembrafrom the Carpathian Mountains inferred from nuclear and chloroplast microsatellites confirms post-glacial range contraction and identifies introduced individuals

Lendvay, Bertalan, Höhn, Mária, Brodbeck, Sabine, Mîndrescu, Marcel, Gugerli, Felix

Journal:

Tree Genetics & Genomes

Année:

2014

Langue:

english

Fichier:

PDF, 1.17 MB

english, 2014

47

Quantifying Dispersal and Establishment Limitation in a Population of an Epiphytic Lichen

Silke Werth, Helene H. Wagner, Felix Gugerli, Rolf Holderegger, Daniela Csencsics, Jesse M. Kalwij and Christoph Scheidegger

Journal:

Année:

2006

Langue:

english

Fichier:

PDF, 2.10 MB

english, 2006

48

Sexual Reproduction in Saxifraga oppositifolia L. and Saxifraga biflora All. (Saxifragaceae) in the Alps

Journal:

International Journal of Plant Sciences

Année:

1997

Langue:

english

Fichier:

PDF, 1.21 MB

english, 1997

49

Community genetics in the time of next-generation molecular technologies

Gugerli, Felix, Brandl, Roland, Castagneyrol, Bastien, Franc, Alain, Jactel, Hervé, Koelewijn, Hans-Peter, Martin, Francis, Peter, Martina, Pritsch, Karin, Schröder, Hilke, Smulders, Marinus J. M., Kr

Journal:

Molecular Ecology

Année:

2013

Langue:

english

Fichier:

PDF, 585 KB

english, 2013

50

A deep dig--hindsight on Holocene vegetation composition from ancient environmental DNA

Gugerli, Felix, Alvarez, Nadir, Tinner, Willy

Journal:

Molecular Ecology

Année:

2013

Langue:

english

Fichier:

PDF, 380 KB

english, 2013